Plotting phylogenetic trees in R: alternating clade highlights
A tutorial on how to plot phylogenetic trees with alternating clade highlights using ggtree
I’m a computational biologist who works on the diversity and evolution of fungi. As of January 2023 I’m a postdoctoral researcher at the Earlham Institute, prior to which I completed my PhD at the Royal Botanic Gardens, Kew and Queen Mary University of London.
My main research interests and expertise lie in using evolutionary genomics approaches to explore questions around fungal lifestyle evolution and plant–fungal interactions.
Recent Posts
Plotting proportional data as nested circles in R
A tutorial on how to plot proportional data as nested circles using packcircles and ggplot2
Marking telomeres on a simple ideogram in R
A tutorial on how to make a very basic telomere-marked ideogram using just ggplot2
Digging into Asana data from my PhD
Visualising my productivity throughout my PhD using my data from Asana.