CV
Skills and expertise
Computational
bioinformatics, genome assembly and annotation, comparative/pan genomics, phylogen*ics, data visualisationProgramming
R, bash, Python, git, HPC computingBiological
fungal biology, microbial ecology, molecular systematicsResearch experience
Research scientist, The Earlham Institute As part of the BBSRC cross-institute Delivering Sustainable Wheat initiative, I’m currently using comparative and pangenomics methods to explore questions around fungal lifestyles; genetic determinants of virulence; and wild vs domestic hosts in Gaeumannomyces and other fungi associated with roots of wheat and wild grass relatives. |
Jan 2023 – |
PhD Biological Sciences, Royal Botanic Gardens Kew and Queen Mary University of London (London NERC DTP) 'Using collections to explore the evolution of plant-associated lifestyles in the Ascomycota' (click to view thesis) |
Sep 2018 – Dec 2022 |
Data and analysis intern – Plant Health Evidence and Analysis Team, Department for Environment, Food and Rural Affairs Following user-centred design principles, I designed and built two R Shiny dashboard apps: one to analyse and visualise plant import data to inform governmental policies on biosecurity and tree planting; and the second to calculate and report the risk associated with import pathways using data from the pest risk register. |
Apr 2022 – Jun 2022 |
Research assistant – Comparative Plant and Fungal Biology Department, Royal Botanic Gardens, Kew I led molecular lab work and data analysis for a project entitled 'Exploring endophyte diversity in MSB seeds' (see my publications) and assisted fieldwork collecting fungi for a project entitled ‘Diversity of the ‘forgotten Kingdom’ in Boyacá, Colombia’. |
Feb 2017 – Aug 2018 |
BSc Biological Sciences with Professional Placement, First Class Honours, The University of Exeter + the College Commendation and the Dean's Commendation. |
Sep 2012 – Jun 2016 |
Sandwich course student – Comparative Plant and Fungal Biology Department, Royal Botanic Gardens, Kew I undertook a research project investigating the evolution of a lesser-known group of parasitic fungi. |
Sep 2014 – Aug 2015 |